Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Rps28P62858 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rps28P62858 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC12.05□□□□□ -0.48
Rps28P62858 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Rps28P62858 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Rps28P62858 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rps28P62858 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Rps28P62858 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rps28P62858 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.03□□□□□ -0.48
Rps28P62858 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rps28P62858 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rps28P62858 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rps28P62858 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Rps28P62858 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rps28P62858 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rps28P62858 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.03□□□□□ -0.48
Rps28P62858 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Rps28P62858 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC12.03□□□□□ -0.48
Rps28P62858 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Rps28P62858 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rps28P62858 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Rps28P62858 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rps28P62858 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rps28P62858 Mipep-204ENSMUST00000225043 1548 ntBASIC12.02□□□□□ -0.48
Rps28P62858 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Rps28P62858 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Gm5131-201ENSMUST00000212776 1238 ntBASIC12.02□□□□□ -0.49
Rps28P62858 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.02□□□□□ -0.49
Rps28P62858 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rps28P62858 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rps28P62858 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rps28P62858 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Rps28P62858 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rps28P62858 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rps28P62858 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rps28P62858 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC12□□□□□ -0.49
Rps28P62858 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Rps28P62858 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rps28P62858 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rps28P62858 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC12□□□□□ -0.49
Rps28P62858 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Rps28P62858 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC12□□□□□ -0.49
Rps28P62858 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rps28P62858 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms