Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks2P56390 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks2P56390 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks2P56390 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cks2P56390 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.78■□□□□ 0.28
Cks2P56390 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cks2P56390 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cks2P56390 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cks2P56390 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cks2P56390 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cks2P56390 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.77■□□□□ 0.28
Cks2P56390 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cks2P56390 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Cks2P56390 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cks2P56390 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cks2P56390 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.76■□□□□ 0.27
Cks2P56390 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cks2P56390 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.76■□□□□ 0.27
Cks2P56390 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cks2P56390 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cks2P56390 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Cks2P56390 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.75■□□□□ 0.27
Cks2P56390 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks2P56390 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.75■□□□□ 0.27
Cks2P56390 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cks2P56390 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks2P56390 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cks2P56390 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.75■□□□□ 0.27
Cks2P56390 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.74■□□□□ 0.27
Cks2P56390 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.74■□□□□ 0.27
Cks2P56390 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cks2P56390 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.74■□□□□ 0.27
Cks2P56390 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Golph3-202ENSMUST00000226517 2359 ntBASIC16.74■□□□□ 0.27
Cks2P56390 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cks2P56390 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks2P56390 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks2P56390 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cks2P56390 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks2P56390 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks2P56390 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cks2P56390 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cks2P56390 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cks2P56390 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.72■□□□□ 0.27
Cks2P56390 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cks2P56390 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cks2P56390 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cks2P56390 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.71■□□□□ 0.27
Cks2P56390 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks2P56390 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.71■□□□□ 0.27
Cks2P56390 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks2P56390 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.71■□□□□ 0.27
Cks2P56390 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cks2P56390 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.71■□□□□ 0.27
Cks2P56390 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cks2P56390 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.71■□□□□ 0.27
Cks2P56390 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Cks2P56390 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks2P56390 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks2P56390 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cks2P56390 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cks2P56390 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cks2P56390 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Cks2P56390 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cks2P56390 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cks2P56390 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cks2P56390 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms