Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 FOL2YGR267C 732 nt5.93□□□□□ -1.46
TY1B-JR1P47098 YMR130WYMR130W 909 nt5.93□□□□□ -1.46
TY1B-JR1P47098 GDE1YPL110C 3672 nt5.93□□□□□ -1.46
TY1B-JR1P47098 CLF1YLR117C 2064 nt5.93□□□□□ -1.46
TY1B-JR1P47098 ALT2YDR111C 1524 nt5.93□□□□□ -1.46
TY1B-JR1P47098 BIK1YCL029C 1323 nt5.92□□□□□ -1.46
TY1B-JR1P47098 MET3YJR010W 1536 nt5.92□□□□□ -1.46
TY1B-JR1P47098 TDA8YAL064C-A 381 nt5.91□□□□□ -1.46
TY1B-JR1P47098 YLR296WYLR296W 327 nt5.91□□□□□ -1.46
TY1B-JR1P47098 ERG7YHR072W 2196 nt5.91□□□□□ -1.46
TY1B-JR1P47098 AAP1YHR047C 2571 nt5.91□□□□□ -1.46
TY1B-JR1P47098 YGR018CYGR018C 330 nt5.9□□□□□ -1.46
TY1B-JR1P47098 AAD10YJR155W 867 nt5.9□□□□□ -1.46
TY1B-JR1P47098 YML131WYML131W 1098 nt5.9□□□□□ -1.46
TY1B-JR1P47098 PPG1YNR032W 1107 nt5.9□□□□□ -1.46
TY1B-JR1P47098 DAL81YIR023W 2913 nt5.9□□□□□ -1.46
TY1B-JR1P47098 YDR271CYDR271C 372 nt5.9□□□□□ -1.47
TY1B-JR1P47098 BNA1YJR025C 534 nt5.9□□□□□ -1.47
TY1B-JR1P47098 ISA1YLL027W 753 nt5.9□□□□□ -1.47
TY1B-JR1P47098 YOR008W-BYOR008W-B 102 nt5.9□□□□□ -1.47
TY1B-JR1P47098 GAS3YMR215W 1575 nt5.89□□□□□ -1.47
TY1B-JR1P47098 MRPL7YDR237W 879 nt5.88□□□□□ -1.47
TY1B-JR1P47098 SKG6YHR149C 2205 nt5.88□□□□□ -1.47
TY1B-JR1P47098 YLR049CYLR049C 1287 nt5.87□□□□□ -1.47
TY1B-JR1P47098 MRT4YKL009W 711 nt5.86□□□□□ -1.47
TY1B-JR1P47098 PEX30YLR324W 1572 nt5.86□□□□□ -1.47
TY1B-JR1P47098 HST1YOL068C 1512 nt5.86□□□□□ -1.47
TY1B-JR1P47098 COX19YLL018C-A 297 nt5.85□□□□□ -1.47
TY1B-JR1P47098 URA4YLR420W 1095 nt5.85□□□□□ -1.47
TY1B-JR1P47098 NRK1YNL129W 723 nt5.85□□□□□ -1.47
TY1B-JR1P47098 POF1YCL047C 777 nt5.85□□□□□ -1.47
TY1B-JR1P47098 HXT7YDR342C 1713 nt5.85□□□□□ -1.47
TY1B-JR1P47098 HXT6YDR343C 1713 nt5.85□□□□□ -1.47
TY1B-JR1P47098 FUN30YAL019W 3396 nt5.85□□□□□ -1.47
TY1B-JR1P47098 UBP7YIL156W 3216 nt5.85□□□□□ -1.47
TY1B-JR1P47098 JIP5YPR169W 1479 nt5.85□□□□□ -1.47
TY1B-JR1P47098 AIR1YIL079C 1083 nt5.85□□□□□ -1.47
TY1B-JR1P47098 MRP21YBL090W 534 nt5.85□□□□□ -1.47
TY1B-JR1P47098 MRP51YPL118W 1035 nt5.85□□□□□ -1.47
TY1B-JR1P47098 PBN1YCL052C 1251 nt5.85□□□□□ -1.47
TY1B-JR1P47098 CTT1YGR088W 1689 nt5.85□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)CtK(CUU)C 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)D1tK(CUU)D1 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)D2tK(CUU)D2 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)E1tK(CUU)E1 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)E2tK(CUU)E2 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)FtK(CUU)F 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)G1tK(CUU)G1 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)G2tK(CUU)G2 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)G3tK(CUU)G3 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)ItK(CUU)I 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)JtK(CUU)J 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)KtK(CUU)K 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)MtK(CUU)M 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 tK(CUU)PtK(CUU)P 73 nt5.84□□□□□ -1.47
TY1B-JR1P47098 JLP1YLL057C 1239 nt5.84□□□□□ -1.47
TY1B-JR1P47098 PRD1YCL057W 2139 nt5.84□□□□□ -1.47
TY1B-JR1P47098 NOG1YPL093W 1944 nt5.84□□□□□ -1.47
TY1B-JR1P47098 YNR061CYNR061C 660 nt5.83□□□□□ -1.48
TY1B-JR1P47098 RMD1YDL001W 1293 nt5.83□□□□□ -1.48
TY1B-JR1P47098 PLP2YOR281C 861 nt5.83□□□□□ -1.48
TY1B-JR1P47098 CMK1YFR014C 1341 nt5.82□□□□□ -1.48
TY1B-JR1P47098 NUP1YOR098C 3231 nt5.82□□□□□ -1.48
TY1B-JR1P47098 GPP1YIL053W 753 nt5.82□□□□□ -1.48
TY1B-JR1P47098 YIM1YMR152W 1098 nt5.82□□□□□ -1.48
TY1B-JR1P47098 ARC40YBR234C 1155 nt5.82□□□□□ -1.48
TY1B-JR1P47098 ADE6YGR061C 4077 nt5.81□□□□□ -1.48
TY1B-JR1P47098 TRM8YDL201W 861 nt5.81□□□□□ -1.48
TY1B-JR1P47098 UBP9YER098W 2265 nt5.81□□□□□ -1.48
TY1B-JR1P47098 LCB2YDR062W 1686 nt5.81□□□□□ -1.48
TY1B-JR1P47098 ALG9YNL219C 1668 nt5.81□□□□□ -1.48
TY1B-JR1P47098 AIM3YBR108W 2844 nt5.81□□□□□ -1.48
TY1B-JR1P47098 CHK1YBR274W 1584 nt5.8□□□□□ -1.48
TY1B-JR1P47098 TFC7YOR110W 1308 nt5.8□□□□□ -1.48
TY1B-JR1P47098 RAD2YGR258C 3096 nt5.8□□□□□ -1.48
TY1B-JR1P47098 TSL1YML100W 3297 nt5.8□□□□□ -1.48
TY1B-JR1P47098 YDL121CYDL121C 450 nt5.8□□□□□ -1.48
TY1B-JR1P47098 YDR250CYDR250C 276 nt5.8□□□□□ -1.48
TY1B-JR1P47098 OAR1YKL055C 837 nt5.8□□□□□ -1.48
TY1B-JR1P47098 POP4YBR257W 840 nt5.8□□□□□ -1.48
TY1B-JR1P47098 YDR056CYDR056C 618 nt5.79□□□□□ -1.48
TY1B-JR1P47098 CDC15YAR019C 2925 nt5.79□□□□□ -1.48
TY1B-JR1P47098 Q0182Q0182 405 nt5.78□□□□□ -1.48
TY1B-JR1P47098 COQ5YML110C 924 nt5.78□□□□□ -1.48
TY1B-JR1P47098 EMP47YFL048C 1338 nt5.78□□□□□ -1.48
TY1B-JR1P47098 SOL4YGR248W 768 nt5.78□□□□□ -1.48
TY1B-JR1P47098 CAT5YOR125C 702 nt5.78□□□□□ -1.48
TY1B-JR1P47098 MSB2YGR014W 3921 nt5.78□□□□□ -1.48
TY1B-JR1P47098 TGL4YKR089C 2733 nt5.77□□□□□ -1.49
TY1B-JR1P47098 FRE3YOR381W 2136 nt5.77□□□□□ -1.49
TY1B-JR1P47098 STE23YLR389C 3084 nt5.76□□□□□ -1.49
TY1B-JR1P47098 AGE2YIL044C 897 nt5.76□□□□□ -1.49
TY1B-JR1P47098 YBL036CYBL036C 774 nt5.76□□□□□ -1.49
TY1B-JR1P47098 LCB5YLR260W 2064 nt5.76□□□□□ -1.49
TY1B-JR1P47098 YEL074WYEL074W 339 nt5.75□□□□□ -1.49
TY1B-JR1P47098 RMR1YGL250W 726 nt5.75□□□□□ -1.49
TY1B-JR1P47098 SFK1YKL051W 1062 nt5.75□□□□□ -1.49
TY1B-JR1P47098 YBR056W-AYBR056W-A 201 nt5.75□□□□□ -1.49
TY1B-JR1P47098 VID22YLR373C 2706 nt5.75□□□□□ -1.49
TY1B-JR1P47098 ROG3YFR022W 2202 nt5.75□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms