Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdx2P43241 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdx2P43241 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdx2P43241 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdx2P43241 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdx2P43241 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cdx2P43241 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.26■□□□□ 0.67
Cdx2P43241 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.26■□□□□ 0.67
Cdx2P43241 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.26■□□□□ 0.67
Cdx2P43241 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdx2P43241 Gm9988-201ENSMUST00000069786 435 ntBASIC19.26■□□□□ 0.67
Cdx2P43241 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdx2P43241 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdx2P43241 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdx2P43241 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdx2P43241 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdx2P43241 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdx2P43241 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdx2P43241 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.25■□□□□ 0.67
Cdx2P43241 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.25■□□□□ 0.67
Cdx2P43241 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Cdx2P43241 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdx2P43241 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Cdx2P43241 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdx2P43241 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdx2P43241 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.24■□□□□ 0.67
Cdx2P43241 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdx2P43241 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdx2P43241 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Cdx2P43241 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdx2P43241 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdx2P43241 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Cdx2P43241 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdx2P43241 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdx2P43241 Gm10602-201ENSMUST00000098239 609 ntBASIC19.23■□□□□ 0.67
Cdx2P43241 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdx2P43241 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdx2P43241 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.22■□□□□ 0.67
Cdx2P43241 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Cdx2P43241 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdx2P43241 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cdx2P43241 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Cdx2P43241 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.22■□□□□ 0.67
Cdx2P43241 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.22■□□□□ 0.67
Cdx2P43241 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Cdx2P43241 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
Cdx2P43241 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdx2P43241 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdx2P43241 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdx2P43241 Mir6236-201ENSMUST00000184437 123 ntBASIC19.21■□□□□ 0.67
Cdx2P43241 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.21■□□□□ 0.67
Cdx2P43241 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.21■□□□□ 0.67
Cdx2P43241 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdx2P43241 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdx2P43241 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdx2P43241 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdx2P43241 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdx2P43241 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.2■□□□□ 0.66
Cdx2P43241 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Cdx2P43241 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cdx2P43241 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdx2P43241 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdx2P43241 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cdx2P43241 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.19■□□□□ 0.66
Cdx2P43241 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdx2P43241 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cdx2P43241 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.19■□□□□ 0.66
Cdx2P43241 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cdx2P43241 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.18■□□□□ 0.66
Cdx2P43241 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cdx2P43241 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.17■□□□□ 0.66
Cdx2P43241 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.17■□□□□ 0.66
Cdx2P43241 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cdx2P43241 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.17■□□□□ 0.66
Cdx2P43241 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.17■□□□□ 0.66
Cdx2P43241 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms