Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thbs1P35441 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thbs1P35441 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Thbs1P35441 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thbs1P35441 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thbs1P35441 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thbs1P35441 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.61■□□□□ 0.57
Thbs1P35441 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thbs1P35441 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Thbs1P35441 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Thbs1P35441 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.6■□□□□ 0.57
Thbs1P35441 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thbs1P35441 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.59■□□□□ 0.57
Thbs1P35441 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thbs1P35441 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.59■□□□□ 0.57
Thbs1P35441 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Thbs1P35441 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.59■□□□□ 0.57
Thbs1P35441 Gm9870-201ENSMUST00000063874 645 ntBASIC18.59■□□□□ 0.57
Thbs1P35441 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Thbs1P35441 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Thbs1P35441 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Thbs1P35441 Notumos-201ENSMUST00000151998 2659 ntBASIC18.58■□□□□ 0.57
Thbs1P35441 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Thbs1P35441 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Thbs1P35441 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Thbs1P35441 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thbs1P35441 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thbs1P35441 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Thbs1P35441 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.58■□□□□ 0.56
Thbs1P35441 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thbs1P35441 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thbs1P35441 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Thbs1P35441 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Thbs1P35441 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Thbs1P35441 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Thbs1P35441 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thbs1P35441 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thbs1P35441 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Thbs1P35441 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thbs1P35441 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thbs1P35441 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thbs1P35441 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thbs1P35441 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thbs1P35441 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Thbs1P35441 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
Thbs1P35441 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.54■□□□□ 0.56
Thbs1P35441 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Thbs1P35441 Etf1-202ENSMUST00000180351 108 ntBASIC18.54■□□□□ 0.56
Thbs1P35441 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.54■□□□□ 0.56
Thbs1P35441 Gm43530-201ENSMUST00000195920 274 ntBASIC18.54■□□□□ 0.56
Thbs1P35441 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
Thbs1P35441 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Thbs1P35441 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Thbs1P35441 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Thbs1P35441 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thbs1P35441 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Thbs1P35441 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thbs1P35441 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Thbs1P35441 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Thbs1P35441 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.52■□□□□ 0.56
Thbs1P35441 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms