Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc11P31313 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc11P31313 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.42■□□□□ 0.7
Hoxc11P31313 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc11P31313 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.42■□□□□ 0.7
Hoxc11P31313 Gm43530-201ENSMUST00000195920 274 ntBASIC19.42■□□□□ 0.7
Hoxc11P31313 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxc11P31313 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.41■□□□□ 0.7
Hoxc11P31313 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.41■□□□□ 0.7
Hoxc11P31313 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxc11P31313 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc11P31313 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc11P31313 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc11P31313 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.4■□□□□ 0.7
Hoxc11P31313 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc11P31313 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Hoxc11P31313 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc11P31313 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxc11P31313 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxc11P31313 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Hoxc11P31313 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc11P31313 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Hoxc11P31313 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc11P31313 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.39■□□□□ 0.69
Hoxc11P31313 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxc11P31313 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Hoxc11P31313 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.38■□□□□ 0.69
Hoxc11P31313 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
Hoxc11P31313 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Hoxc11P31313 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.38■□□□□ 0.69
Hoxc11P31313 Gm8493-201ENSMUST00000196881 489 ntBASIC19.38■□□□□ 0.69
Hoxc11P31313 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.38■□□□□ 0.69
Hoxc11P31313 Golph3-202ENSMUST00000226517 2359 ntBASIC19.38■□□□□ 0.69
Hoxc11P31313 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxc11P31313 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc11P31313 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.37■□□□□ 0.69
Hoxc11P31313 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc11P31313 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc11P31313 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Hoxc11P31313 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc11P31313 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.37■□□□□ 0.69
Hoxc11P31313 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Hoxc11P31313 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc11P31313 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.37■□□□□ 0.69
Hoxc11P31313 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.37■□□□□ 0.69
Hoxc11P31313 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxc11P31313 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Gm43017-201ENSMUST00000198296 752 ntBASIC19.36■□□□□ 0.69
Hoxc11P31313 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.36■□□□□ 0.69
Hoxc11P31313 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hoxc11P31313 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Hoxc11P31313 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Hoxc11P31313 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Hoxc11P31313 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Hoxc11P31313 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxc11P31313 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hoxc11P31313 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Hoxc11P31313 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc11P31313 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc11P31313 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc11P31313 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc11P31313 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc11P31313 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc11P31313 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxc11P31313 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxc11P31313 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hoxc11P31313 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hoxc11P31313 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hoxc11P31313 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxc11P31313 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxc11P31313 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms