Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.42■□□□□ 0.54
Hmgn1P18608 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgn1P18608 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgn1P18608 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Hmgn1P18608 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hmgn1P18608 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.41■□□□□ 0.54
Hmgn1P18608 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Hmgn1P18608 Gm11175-201ENSMUST00000116172 543 ntBASIC18.41■□□□□ 0.54
Hmgn1P18608 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgn1P18608 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hmgn1P18608 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.4■□□□□ 0.54
Hmgn1P18608 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmgn1P18608 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgn1P18608 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.39■□□□□ 0.54
Hmgn1P18608 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgn1P18608 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgn1P18608 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgn1P18608 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn1P18608 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.39■□□□□ 0.53
Hmgn1P18608 Gm12366-201ENSMUST00000121722 873 ntBASIC18.39■□□□□ 0.53
Hmgn1P18608 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.39■□□□□ 0.53
Hmgn1P18608 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.39■□□□□ 0.53
Hmgn1P18608 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.39■□□□□ 0.53
Hmgn1P18608 Gm5786-201ENSMUST00000085368 882 ntBASIC18.39■□□□□ 0.53
Hmgn1P18608 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn1P18608 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn1P18608 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn1P18608 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn1P18608 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgn1P18608 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn1P18608 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.38■□□□□ 0.53
Hmgn1P18608 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn1P18608 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.38■□□□□ 0.53
Hmgn1P18608 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn1P18608 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.38■□□□□ 0.53
Hmgn1P18608 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hmgn1P18608 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn1P18608 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn1P18608 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn1P18608 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgn1P18608 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn1P18608 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn1P18608 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn1P18608 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.37■□□□□ 0.53
Hmgn1P18608 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hmgn1P18608 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.36■□□□□ 0.53
Hmgn1P18608 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hmgn1P18608 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.36■□□□□ 0.53
Hmgn1P18608 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.35■□□□□ 0.53
Hmgn1P18608 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.35■□□□□ 0.53
Hmgn1P18608 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hmgn1P18608 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hmgn1P18608 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.34■□□□□ 0.53
Hmgn1P18608 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hmgn1P18608 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.34■□□□□ 0.53
Hmgn1P18608 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hmgn1P18608 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hmgn1P18608 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hmgn1P18608 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms