Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h2P0C090 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rc3h2P0C090 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.52■□□□□ 0.88
Rc3h2P0C090 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h2P0C090 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rc3h2P0C090 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.52■□□□□ 0.88
Rc3h2P0C090 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Rc3h2P0C090 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.87
Rc3h2P0C090 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Rc3h2P0C090 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rc3h2P0C090 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.5■□□□□ 0.87
Rc3h2P0C090 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.5■□□□□ 0.87
Rc3h2P0C090 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h2P0C090 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rc3h2P0C090 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rc3h2P0C090 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h2P0C090 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h2P0C090 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rc3h2P0C090 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h2P0C090 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h2P0C090 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h2P0C090 Gm43060-201ENSMUST00000200621 289 ntBASIC20.48■□□□□ 0.87
Rc3h2P0C090 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rc3h2P0C090 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h2P0C090 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.47■□□□□ 0.87
Rc3h2P0C090 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h2P0C090 Smad6-203ENSMUST00000179458 273 ntBASIC20.47■□□□□ 0.87
Rc3h2P0C090 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h2P0C090 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h2P0C090 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rc3h2P0C090 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Gm5874-201ENSMUST00000096101 508 ntBASIC20.46■□□□□ 0.87
Rc3h2P0C090 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rc3h2P0C090 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h2P0C090 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h2P0C090 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Rc3h2P0C090 Mir6236-201ENSMUST00000184437 123 ntBASIC20.45■□□□□ 0.86
Rc3h2P0C090 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rc3h2P0C090 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.45■□□□□ 0.86
Rc3h2P0C090 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.45■□□□□ 0.86
Rc3h2P0C090 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rc3h2P0C090 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rc3h2P0C090 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.43■□□□□ 0.86
Rc3h2P0C090 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rc3h2P0C090 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rc3h2P0C090 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rc3h2P0C090 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms