Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa9P09631 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa9P09631 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa9P09631 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Hoxa9P09631 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hoxa9P09631 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa9P09631 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa9P09631 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.28■□□□□ 0.84
Hoxa9P09631 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.28■□□□□ 0.84
Hoxa9P09631 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.28■□□□□ 0.84
Hoxa9P09631 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hoxa9P09631 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa9P09631 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.28■□□□□ 0.84
Hoxa9P09631 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hoxa9P09631 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa9P09631 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hoxa9P09631 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.27■□□□□ 0.84
Hoxa9P09631 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hoxa9P09631 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hoxa9P09631 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.26■□□□□ 0.83
Hoxa9P09631 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
Hoxa9P09631 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.26■□□□□ 0.83
Hoxa9P09631 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.26■□□□□ 0.83
Hoxa9P09631 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.26■□□□□ 0.83
Hoxa9P09631 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxa9P09631 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa9P09631 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa9P09631 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa9P09631 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.25■□□□□ 0.83
Hoxa9P09631 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa9P09631 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.25■□□□□ 0.83
Hoxa9P09631 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa9P09631 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxa9P09631 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Hoxa9P09631 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Hoxa9P09631 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Smad6-203ENSMUST00000179458 273 ntBASIC20.24■□□□□ 0.83
Hoxa9P09631 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxa9P09631 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa9P09631 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.23■□□□□ 0.83
Hoxa9P09631 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa9P09631 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa9P09631 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa9P09631 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa9P09631 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxa9P09631 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.22■□□□□ 0.83
Hoxa9P09631 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa9P09631 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa9P09631 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa9P09631 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa9P09631 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.22■□□□□ 0.83
Hoxa9P09631 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.22■□□□□ 0.83
Hoxa9P09631 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa9P09631 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Hoxa9P09631 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxa9P09631 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hoxa9P09631 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa9P09631 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa9P09631 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxa9P09631 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Hoxa9P09631 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.2■□□□□ 0.82
Hoxa9P09631 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa9P09631 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
Hoxa9P09631 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.2■□□□□ 0.82
Hoxa9P09631 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxa9P09631 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.2■□□□□ 0.82
Hoxa9P09631 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxa9P09631 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxa9P09631 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxa9P09631 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.19■□□□□ 0.82
Hoxa9P09631 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hoxa9P09631 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.19■□□□□ 0.82
Hoxa9P09631 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxa9P09631 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxa9P09631 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Hoxa9P09631 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Hoxa9P09631 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.19■□□□□ 0.82
Hoxa9P09631 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.19■□□□□ 0.82
Hoxa9P09631 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxa9P09631 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxa9P09631 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxa9P09631 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxa9P09631 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxa9P09631 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxa9P09631 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms