Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.01■□□□□ 0.63
ApoeP08226 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.01■□□□□ 0.63
ApoeP08226 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ApoeP08226 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ApoeP08226 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ApoeP08226 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ApoeP08226 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ApoeP08226 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19■□□□□ 0.63
ApoeP08226 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ApoeP08226 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.99■□□□□ 0.63
ApoeP08226 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ApoeP08226 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ApoeP08226 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ApoeP08226 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ApoeP08226 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.98■□□□□ 0.63
ApoeP08226 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.98■□□□□ 0.63
ApoeP08226 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.98■□□□□ 0.63
ApoeP08226 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ApoeP08226 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ApoeP08226 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.98■□□□□ 0.63
ApoeP08226 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ApoeP08226 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ApoeP08226 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ApoeP08226 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.97■□□□□ 0.63
ApoeP08226 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
ApoeP08226 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ApoeP08226 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ApoeP08226 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ApoeP08226 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ApoeP08226 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.96■□□□□ 0.63
ApoeP08226 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ApoeP08226 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.96■□□□□ 0.63
ApoeP08226 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.96■□□□□ 0.63
ApoeP08226 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ApoeP08226 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.95■□□□□ 0.62
ApoeP08226 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
ApoeP08226 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ApoeP08226 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ApoeP08226 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.94■□□□□ 0.62
ApoeP08226 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ApoeP08226 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ApoeP08226 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.94■□□□□ 0.62
ApoeP08226 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ApoeP08226 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ApoeP08226 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ApoeP08226 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ApoeP08226 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.93■□□□□ 0.62
ApoeP08226 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.93■□□□□ 0.62
ApoeP08226 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.93■□□□□ 0.62
ApoeP08226 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ApoeP08226 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ApoeP08226 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ApoeP08226 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ApoeP08226 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ApoeP08226 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
ApoeP08226 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ApoeP08226 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ApoeP08226 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ApoeP08226 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.92■□□□□ 0.62
ApoeP08226 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ApoeP08226 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms