Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04940 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.39■□□□□ 0.21
P04940 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
P04940 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.39■□□□□ 0.21
P04940 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Mir6236-201ENSMUST00000184437 123 ntBASIC16.39■□□□□ 0.21
P04940 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.39■□□□□ 0.21
P04940 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
P04940 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04940 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.38■□□□□ 0.21
P04940 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
P04940 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
P04940 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P04940 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
P04940 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04940 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P04940 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04940 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
P04940 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
P04940 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.37■□□□□ 0.21
P04940 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04940 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.37■□□□□ 0.21
P04940 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
P04940 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
P04940 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
P04940 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
P04940 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04940 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
P04940 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04940 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04940 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04940 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04940 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.34■□□□□ 0.21
P04940 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
P04940 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
P04940 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04940 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.34■□□□□ 0.21
P04940 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04940 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04940 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.33■□□□□ 0.21
P04940 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04940 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.33■□□□□ 0.2
P04940 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04940 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.33■□□□□ 0.2
P04940 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.33■□□□□ 0.2
P04940 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.33■□□□□ 0.2
P04940 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04940 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04940 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
P04940 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04940 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
P04940 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04940 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
P04940 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
P04940 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04940 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04940 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
P04940 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04940 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
P04940 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
P04940 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms