Protein–RNA interactions for Protein: P01653

Ig kappa chain V-V region W3082, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01653 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
P01653 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
P01653 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.11■□□□□ 0.97
P01653 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.11■□□□□ 0.97
P01653 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
P01653 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
P01653 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.1■□□□□ 0.97
P01653 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
P01653 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.1■□□□□ 0.97
P01653 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
P01653 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
P01653 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01653 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01653 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
P01653 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
P01653 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
P01653 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01653 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01653 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01653 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.09■□□□□ 0.97
P01653 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
P01653 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
P01653 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.08■□□□□ 0.97
P01653 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.08■□□□□ 0.97
P01653 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
P01653 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
P01653 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
P01653 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01653 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01653 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
P01653 Gm12251-201ENSMUST00000117893 792 ntBASIC21.07■□□□□ 0.96
P01653 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01653 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
P01653 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.07■□□□□ 0.96
P01653 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
P01653 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01653 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.07■□□□□ 0.96
P01653 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.07■□□□□ 0.96
P01653 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
P01653 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.06■□□□□ 0.96
P01653 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.06■□□□□ 0.96
P01653 Mir7075-201ENSMUST00000184187 82 ntBASIC21.06■□□□□ 0.96
P01653 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
P01653 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
P01653 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P01653 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
P01653 Spcs1-204ENSMUST00000226782 949 ntBASIC21.05■□□□□ 0.96
P01653 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.05■□□□□ 0.96
P01653 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01653 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
P01653 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
P01653 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.05■□□□□ 0.96
P01653 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 Gm6139-201ENSMUST00000079261 882 ntBASIC21.04■□□□□ 0.96
P01653 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.04■□□□□ 0.96
P01653 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
P01653 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
P01653 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P01653 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
P01653 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
P01653 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
P01653 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
P01653 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
P01653 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P01653 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
P01653 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01653 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.02■□□□□ 0.96
P01653 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P01653 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
P01653 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.02■□□□□ 0.96
P01653 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
P01653 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01653 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01653 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P01653 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01653 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
P01653 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01653 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P01653 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
P01653 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms