Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sh2d1aO88890 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sh2d1aO88890 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.14□□□□□ -0.15
Sh2d1aO88890 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.13□□□□□ -0.15
Sh2d1aO88890 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Gm40881-201ENSMUST00000223397 166 ntBASIC14.12□□□□□ -0.15
Sh2d1aO88890 Gm5812-201ENSMUST00000061073 957 ntBASIC14.12□□□□□ -0.15
Sh2d1aO88890 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.12□□□□□ -0.15
Sh2d1aO88890 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Gm15546-201ENSMUST00000122095 826 ntBASIC14.11□□□□□ -0.15
Sh2d1aO88890 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Sh2d1aO88890 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.1□□□□□ -0.15
Sh2d1aO88890 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.1□□□□□ -0.15
Sh2d1aO88890 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Sh2d1aO88890 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh2d1aO88890 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh2d1aO88890 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.09□□□□□ -0.15
Sh2d1aO88890 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sh2d1aO88890 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Sh2d1aO88890 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sh2d1aO88890 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.09□□□□□ -0.15
Sh2d1aO88890 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.09□□□□□ -0.15
Sh2d1aO88890 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms