Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hcn1O88704 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.15■□□□□ 0.66
Hcn1O88704 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hcn1O88704 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.14■□□□□ 0.66
Hcn1O88704 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hcn1O88704 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hcn1O88704 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hcn1O88704 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hcn1O88704 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hcn1O88704 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hcn1O88704 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn1O88704 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn1O88704 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn1O88704 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hcn1O88704 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn1O88704 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn1O88704 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hcn1O88704 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Hcn1O88704 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Hcn1O88704 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hcn1O88704 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.12■□□□□ 0.65
Hcn1O88704 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Hcn1O88704 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hcn1O88704 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcn1O88704 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcn1O88704 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
Hcn1O88704 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hcn1O88704 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hcn1O88704 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.11■□□□□ 0.65
Hcn1O88704 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.11■□□□□ 0.65
Hcn1O88704 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.1■□□□□ 0.65
Hcn1O88704 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Hcn1O88704 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Hcn1O88704 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.1■□□□□ 0.65
Hcn1O88704 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hcn1O88704 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn1O88704 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn1O88704 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn1O88704 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn1O88704 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn1O88704 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hcn1O88704 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hcn1O88704 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hcn1O88704 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn1O88704 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn1O88704 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Hcn1O88704 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Hcn1O88704 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Hcn1O88704 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hcn1O88704 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.07■□□□□ 0.64
Hcn1O88704 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hcn1O88704 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Hcn1O88704 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Hcn1O88704 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn1O88704 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hcn1O88704 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.06■□□□□ 0.64
Hcn1O88704 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.06■□□□□ 0.64
Hcn1O88704 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 175.2 ms