Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pde6dO55057 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Pde6dO55057 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pde6dO55057 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pde6dO55057 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.86■□□□□ 0.13
Pde6dO55057 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pde6dO55057 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pde6dO55057 Gm6821-201ENSMUST00000107540 542 ntBASIC15.86■□□□□ 0.13
Pde6dO55057 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pde6dO55057 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pde6dO55057 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pde6dO55057 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pde6dO55057 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pde6dO55057 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pde6dO55057 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
Pde6dO55057 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.85■□□□□ 0.13
Pde6dO55057 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pde6dO55057 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pde6dO55057 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pde6dO55057 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Pde6dO55057 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pde6dO55057 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pde6dO55057 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.84■□□□□ 0.13
Pde6dO55057 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pde6dO55057 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.84■□□□□ 0.13
Pde6dO55057 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pde6dO55057 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pde6dO55057 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.84■□□□□ 0.13
Pde6dO55057 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pde6dO55057 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pde6dO55057 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pde6dO55057 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Pde6dO55057 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pde6dO55057 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.83■□□□□ 0.12
Pde6dO55057 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pde6dO55057 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pde6dO55057 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pde6dO55057 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pde6dO55057 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Pde6dO55057 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pde6dO55057 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6dO55057 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6dO55057 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pde6dO55057 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.82■□□□□ 0.12
Pde6dO55057 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6dO55057 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6dO55057 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6dO55057 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.82■□□□□ 0.12
Pde6dO55057 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pde6dO55057 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6dO55057 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6dO55057 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pde6dO55057 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6dO55057 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6dO55057 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pde6dO55057 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Pde6dO55057 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Pde6dO55057 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6dO55057 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6dO55057 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Pde6dO55057 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pde6dO55057 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pde6dO55057 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC15.8■□□□□ 0.12
Pde6dO55057 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6dO55057 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6dO55057 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pde6dO55057 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6dO55057 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pde6dO55057 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pde6dO55057 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Pde6dO55057 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Pde6dO55057 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pde6dO55057 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC15.79■□□□□ 0.12
Pde6dO55057 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.79■□□□□ 0.12
Pde6dO55057 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.79■□□□□ 0.12
Pde6dO55057 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pde6dO55057 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pde6dO55057 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pde6dO55057 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms