Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rnf13O54965 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf13O54965 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rnf13O54965 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.21■□□□□ 0.51
Rnf13O54965 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rnf13O54965 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.21■□□□□ 0.51
Rnf13O54965 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rnf13O54965 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rnf13O54965 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf13O54965 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf13O54965 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.2■□□□□ 0.5
Rnf13O54965 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Rnf13O54965 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf13O54965 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.2■□□□□ 0.5
Rnf13O54965 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rnf13O54965 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.19■□□□□ 0.5
Rnf13O54965 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rnf13O54965 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rnf13O54965 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.19■□□□□ 0.5
Rnf13O54965 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rnf13O54965 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rnf13O54965 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf13O54965 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.18■□□□□ 0.5
Rnf13O54965 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rnf13O54965 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf13O54965 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rnf13O54965 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rnf13O54965 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.17■□□□□ 0.5
Rnf13O54965 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf13O54965 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf13O54965 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf13O54965 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.17■□□□□ 0.5
Rnf13O54965 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf13O54965 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf13O54965 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf13O54965 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf13O54965 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.16■□□□□ 0.5
Rnf13O54965 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf13O54965 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf13O54965 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf13O54965 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf13O54965 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.15■□□□□ 0.5
Rnf13O54965 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf13O54965 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf13O54965 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Rnf13O54965 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf13O54965 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf13O54965 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf13O54965 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf13O54965 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rnf13O54965 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf13O54965 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf13O54965 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf13O54965 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf13O54965 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf13O54965 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Rnf13O54965 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf13O54965 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf13O54965 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms