Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a6O35544 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a6O35544 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a6O35544 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a6O35544 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a6O35544 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a6O35544 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Slc1a6O35544 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc1a6O35544 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Slc1a6O35544 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Slc1a6O35544 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Slc1a6O35544 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Slc1a6O35544 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Slc1a6O35544 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.83■□□□□ 0.76
Slc1a6O35544 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Slc1a6O35544 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.82■□□□□ 0.76
Slc1a6O35544 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.82■□□□□ 0.76
Slc1a6O35544 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Slc1a6O35544 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc1a6O35544 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc1a6O35544 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Slc1a6O35544 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Slc1a6O35544 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a6O35544 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a6O35544 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.81■□□□□ 0.76
Slc1a6O35544 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.81■□□□□ 0.76
Slc1a6O35544 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a6O35544 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a6O35544 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a6O35544 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a6O35544 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.81■□□□□ 0.76
Slc1a6O35544 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.81■□□□□ 0.76
Slc1a6O35544 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Slc1a6O35544 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a6O35544 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a6O35544 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a6O35544 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.8■□□□□ 0.76
Slc1a6O35544 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a6O35544 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a6O35544 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a6O35544 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Slc1a6O35544 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Slc1a6O35544 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.79■□□□□ 0.76
Slc1a6O35544 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Slc1a6O35544 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.78■□□□□ 0.76
Slc1a6O35544 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a6O35544 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.78■□□□□ 0.76
Slc1a6O35544 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a6O35544 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.78■□□□□ 0.76
Slc1a6O35544 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a6O35544 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Slc1a6O35544 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a6O35544 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Slc1a6O35544 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a6O35544 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a6O35544 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a6O35544 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Slc1a6O35544 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc1a6O35544 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.76■□□□□ 0.75
Slc1a6O35544 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Slc1a6O35544 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.76■□□□□ 0.75
Slc1a6O35544 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Slc1a6O35544 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc1a6O35544 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a6O35544 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a6O35544 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a6O35544 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a6O35544 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a6O35544 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc1a6O35544 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc1a6O35544 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a6O35544 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc1a6O35544 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.74■□□□□ 0.75
Slc1a6O35544 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc1a6O35544 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms