Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.51■□□□□ 0.87
Trove2O08848 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trove2O08848 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trove2O08848 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trove2O08848 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trove2O08848 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trove2O08848 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trove2O08848 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trove2O08848 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trove2O08848 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Trove2O08848 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trove2O08848 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trove2O08848 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trove2O08848 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trove2O08848 Gm45444-201ENSMUST00000211394 898 ntBASIC20.49■□□□□ 0.87
Trove2O08848 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trove2O08848 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Trove2O08848 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trove2O08848 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trove2O08848 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trove2O08848 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trove2O08848 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trove2O08848 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.48■□□□□ 0.87
Trove2O08848 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trove2O08848 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.48■□□□□ 0.87
Trove2O08848 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trove2O08848 Gm5921-201ENSMUST00000075898 882 ntBASIC20.48■□□□□ 0.87
Trove2O08848 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.48■□□□□ 0.87
Trove2O08848 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.48■□□□□ 0.87
Trove2O08848 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.48■□□□□ 0.87
Trove2O08848 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trove2O08848 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trove2O08848 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Trove2O08848 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trove2O08848 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Trove2O08848 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trove2O08848 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trove2O08848 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.47■□□□□ 0.87
Trove2O08848 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trove2O08848 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trove2O08848 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trove2O08848 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trove2O08848 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trove2O08848 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.47■□□□□ 0.87
Trove2O08848 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trove2O08848 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trove2O08848 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.46■□□□□ 0.87
Trove2O08848 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.46■□□□□ 0.87
Trove2O08848 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.46■□□□□ 0.87
Trove2O08848 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trove2O08848 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Trove2O08848 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trove2O08848 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trove2O08848 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trove2O08848 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Trove2O08848 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trove2O08848 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Trove2O08848 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.45■□□□□ 0.86
Trove2O08848 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trove2O08848 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.45■□□□□ 0.86
Trove2O08848 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.45■□□□□ 0.86
Trove2O08848 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trove2O08848 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trove2O08848 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trove2O08848 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trove2O08848 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trove2O08848 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trove2O08848 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trove2O08848 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trove2O08848 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.44■□□□□ 0.86
Trove2O08848 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.44■□□□□ 0.86
Trove2O08848 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trove2O08848 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.44■□□□□ 0.86
Trove2O08848 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.44■□□□□ 0.86
Trove2O08848 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Trove2O08848 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.44■□□□□ 0.86
Trove2O08848 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trove2O08848 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trove2O08848 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trove2O08848 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trove2O08848 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trove2O08848 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trove2O08848 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trove2O08848 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trove2O08848 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trove2O08848 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trove2O08848 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.42■□□□□ 0.86
Trove2O08848 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trove2O08848 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Trove2O08848 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trove2O08848 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trove2O08848 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms