Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Smim22J3QP37 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smim22J3QP37 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.2■□□□□ 0.82
Smim22J3QP37 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.2■□□□□ 0.82
Smim22J3QP37 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Gm5867-201ENSMUST00000063197 592 ntBASIC20.2■□□□□ 0.82
Smim22J3QP37 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smim22J3QP37 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.19■□□□□ 0.82
Smim22J3QP37 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Smim22J3QP37 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.19■□□□□ 0.82
Smim22J3QP37 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim22J3QP37 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim22J3QP37 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim22J3QP37 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.18■□□□□ 0.82
Smim22J3QP37 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.18■□□□□ 0.82
Smim22J3QP37 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.18■□□□□ 0.82
Smim22J3QP37 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim22J3QP37 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim22J3QP37 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smim22J3QP37 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.18■□□□□ 0.82
Smim22J3QP37 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Smim22J3QP37 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Gm10517-202ENSMUST00000192970 758 ntBASIC20.17■□□□□ 0.82
Smim22J3QP37 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim22J3QP37 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim22J3QP37 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.16■□□□□ 0.82
Smim22J3QP37 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.16■□□□□ 0.82
Smim22J3QP37 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smim22J3QP37 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.16■□□□□ 0.82
Smim22J3QP37 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Smim22J3QP37 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.16■□□□□ 0.82
Smim22J3QP37 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim22J3QP37 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim22J3QP37 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Smim22J3QP37 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smim22J3QP37 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim22J3QP37 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smim22J3QP37 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Smim22J3QP37 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smim22J3QP37 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Smim22J3QP37 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.14■□□□□ 0.81
Smim22J3QP37 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim22J3QP37 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Smim22J3QP37 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim22J3QP37 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim22J3QP37 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smim22J3QP37 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Smim22J3QP37 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.13■□□□□ 0.81
Smim22J3QP37 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Smim22J3QP37 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.13■□□□□ 0.81
Smim22J3QP37 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim22J3QP37 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim22J3QP37 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim22J3QP37 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim22J3QP37 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.12■□□□□ 0.81
Smim22J3QP37 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.12■□□□□ 0.81
Smim22J3QP37 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim22J3QP37 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim22J3QP37 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim22J3QP37 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.12■□□□□ 0.81
Smim22J3QP37 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smim22J3QP37 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smim22J3QP37 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smim22J3QP37 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.11■□□□□ 0.81
Smim22J3QP37 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smim22J3QP37 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim22J3QP37 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim22J3QP37 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Smim22J3QP37 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim22J3QP37 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim22J3QP37 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim22J3QP37 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.1■□□□□ 0.81
Smim22J3QP37 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smim22J3QP37 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smim22J3QP37 Gm7290-201ENSMUST00000104990 617 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms