Protein–RNA interactions for Protein: D3Z6P9

Ddx43, DEAD (Asp-Glu-Ala-Asp) box polypeptide 43, mousemouse

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx43D3Z6P9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx43D3Z6P9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx43D3Z6P9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx43D3Z6P9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx43D3Z6P9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx43D3Z6P9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx43D3Z6P9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx43D3Z6P9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx43D3Z6P9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx43D3Z6P9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.2■□□□□ 0.82
Ddx43D3Z6P9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.2■□□□□ 0.82
Ddx43D3Z6P9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
Ddx43D3Z6P9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ddx43D3Z6P9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Mir7075-201ENSMUST00000184187 82 ntBASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ddx43D3Z6P9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Ddx43D3Z6P9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx43D3Z6P9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx43D3Z6P9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.17■□□□□ 0.82
Ddx43D3Z6P9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Ddx43D3Z6P9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ddx43D3Z6P9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx43D3Z6P9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Ddx43D3Z6P9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.16■□□□□ 0.82
Ddx43D3Z6P9 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx43D3Z6P9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ddx43D3Z6P9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Mir6236-201ENSMUST00000184437 123 ntBASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ddx43D3Z6P9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ddx43D3Z6P9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx43D3Z6P9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.13■□□□□ 0.81
Ddx43D3Z6P9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx43D3Z6P9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ddx43D3Z6P9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Gm6139-201ENSMUST00000079261 882 ntBASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ddx43D3Z6P9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ddx43D3Z6P9 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.1■□□□□ 0.81
Ddx43D3Z6P9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ddx43D3Z6P9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms