Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.17■□□□□ 0.34
Gm4950D3YUM8 Gm15820-201ENSMUST00000201566 728 ntBASIC17.17■□□□□ 0.34
Gm4950D3YUM8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm4950D3YUM8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm4950D3YUM8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm4950D3YUM8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm4950D3YUM8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Gm5812-201ENSMUST00000061073 957 ntBASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm4950D3YUM8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm4950D3YUM8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Gm4950D3YUM8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm4950D3YUM8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm4950D3YUM8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.12■□□□□ 0.33
Gm4950D3YUM8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm4950D3YUM8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm4950D3YUM8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Gm15546-201ENSMUST00000122095 826 ntBASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm4950D3YUM8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms