Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h2acC0HKE2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h2acC0HKE2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hist1h2acC0HKE2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Hist1h2acC0HKE2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hist1h2acC0HKE2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.33■□□□□ 0.52
Hist1h2acC0HKE2 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.33■□□□□ 0.52
Hist1h2acC0HKE2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.33■□□□□ 0.52
Hist1h2acC0HKE2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h2acC0HKE2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h2acC0HKE2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h2acC0HKE2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h2acC0HKE2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h2acC0HKE2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms