Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim17A0A504 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim17A0A504 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.19■□□□□ 0.5
Smim17A0A504 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.19■□□□□ 0.5
Smim17A0A504 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim17A0A504 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Smim17A0A504 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim17A0A504 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.19■□□□□ 0.5
Smim17A0A504 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim17A0A504 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smim17A0A504 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Smim17A0A504 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Gm8503-201ENSMUST00000118131 455 ntBASIC18.18■□□□□ 0.5
Smim17A0A504 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Smim17A0A504 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.18■□□□□ 0.5
Smim17A0A504 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smim17A0A504 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smim17A0A504 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Smim17A0A504 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Smim17A0A504 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
Smim17A0A504 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Smim17A0A504 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smim17A0A504 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Smim17A0A504 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.16■□□□□ 0.5
Smim17A0A504 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim17A0A504 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Smim17A0A504 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smim17A0A504 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.15■□□□□ 0.5
Smim17A0A504 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Smim17A0A504 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.15■□□□□ 0.5
Smim17A0A504 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smim17A0A504 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smim17A0A504 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Smim17A0A504 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Smim17A0A504 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Smim17A0A504 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smim17A0A504 Mir3960-201ENSMUST00000198213 73 ntBASIC18.14■□□□□ 0.49
Smim17A0A504 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim17A0A504 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim17A0A504 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Smim17A0A504 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smim17A0A504 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smim17A0A504 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Smim17A0A504 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.13■□□□□ 0.49
Smim17A0A504 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.13■□□□□ 0.49
Smim17A0A504 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.13■□□□□ 0.49
Smim17A0A504 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smim17A0A504 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smim17A0A504 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.13■□□□□ 0.49
Smim17A0A504 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Smim17A0A504 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Smim17A0A504 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Smim17A0A504 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Smim17A0A504 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.12■□□□□ 0.49
Smim17A0A504 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Smim17A0A504 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smim17A0A504 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.12■□□□□ 0.49
Smim17A0A504 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Smim17A0A504 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smim17A0A504 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms