Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lnp1A0A1B0GSK3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Gm22238-201ENSMUST00000175222 88 ntBASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lnp1A0A1B0GSK3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.72■□□□□ 0.27
Lnp1A0A1B0GSK3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.72■□□□□ 0.27
Lnp1A0A1B0GSK3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lnp1A0A1B0GSK3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lnp1A0A1B0GSK3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lnp1A0A1B0GSK3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lnp1A0A1B0GSK3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lnp1A0A1B0GSK3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lnp1A0A1B0GSK3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Gm9870-201ENSMUST00000063874 645 ntBASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lnp1A0A1B0GSK3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lnp1A0A1B0GSK3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Lnp1A0A1B0GSK3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Lnp1A0A1B0GSK3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Lnp1A0A1B0GSK3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lnp1A0A1B0GSK3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lnp1A0A1B0GSK3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Lnp1A0A1B0GSK3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Lnp1A0A1B0GSK3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Lnp1A0A1B0GSK3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms