Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Iqck-206ENSMUST00000208658 2891 ntBASIC13.81□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Mir6538-201ENSMUST00000183713 110 ntBASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Gm4430-201ENSMUST00000192413 1943 ntBASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Golph3-202ENSMUST00000226517 2359 ntBASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Trav13d-4A0A0G2JFX3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav13d-4A0A0G2JFX3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms