Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Gm9959-201ENSMUST00000068277 390 ntBASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.58□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9n-2A0A0G2JDP3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Gm7143-201ENSMUST00000222811 859 ntBASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav9n-2A0A0G2JDP3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms