Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-3A0A0B4J1H2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Golph3-205ENSMUST00000228671 2842 ntBASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-3A0A0B4J1H2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms