Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ighv1-20A0A0A6YX66 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ighv1-20A0A0A6YX66 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ighv1-20A0A0A6YX66 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-20A0A0A6YX66 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Ighv1-20A0A0A6YX66 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-20A0A0A6YX66 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ighv1-20A0A0A6YX66 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ighv1-20A0A0A6YX66 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ighv1-20A0A0A6YX66 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gm8493-201ENSMUST00000196881 489 ntBASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gm6139-201ENSMUST00000079261 882 ntBASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.24■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Serp2-204ENSMUST00000228055 705 ntBASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ighv1-20A0A0A6YX66 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ighv1-20A0A0A6YX66 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Mir6236-201ENSMUST00000184437 123 ntBASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ighv1-20A0A0A6YX66 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms