Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav6d-5A0A075B6B9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6d-5A0A075B6B9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trav6d-5A0A075B6B9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-5A0A075B6B9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-5A0A075B6B9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-5A0A075B6B9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav6d-5A0A075B6B9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Trav6d-5A0A075B6B9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav6d-5A0A075B6B9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav6d-5A0A075B6B9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-5A0A075B6B9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-5A0A075B6B9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-5A0A075B6B9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-5A0A075B6B9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-5A0A075B6B9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav6d-5A0A075B6B9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav6d-5A0A075B6B9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav6d-5A0A075B6B9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav6d-5A0A075B6B9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-5A0A075B6B9 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-5A0A075B6B9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-5A0A075B6B9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-5A0A075B6B9 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-5A0A075B6B9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-5A0A075B6B9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav6d-5A0A075B6B9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6d-5A0A075B6B9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav6d-5A0A075B6B9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
Trav6d-5A0A075B6B9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav6d-5A0A075B6B9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav6d-5A0A075B6B9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms