Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC16.39■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Trav15-2-dv6-2A0A075B650 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Gm12366-201ENSMUST00000121722 873 ntBASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Gm5786-201ENSMUST00000085368 882 ntBASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav15-2-dv6-2A0A075B650 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms