Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Gm15820-201ENSMUST00000201566 728 ntBASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Gm5812-201ENSMUST00000061073 957 ntBASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav1A0A075B5Z4 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav1A0A075B5Z4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav1A0A075B5Z4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.77■□□□□ 0.6
Trav1A0A075B5Z4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.77■□□□□ 0.6
Trav1A0A075B5Z4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav1A0A075B5Z4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav1A0A075B5Z4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav1A0A075B5Z4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav1A0A075B5Z4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav1A0A075B5Z4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav1A0A075B5Z4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav1A0A075B5Z4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Gm9870-201ENSMUST00000063874 645 ntBASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav1A0A075B5Z4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav1A0A075B5Z4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.73■□□□□ 0.59
Trav1A0A075B5Z4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Gm43530-201ENSMUST00000195920 274 ntBASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav1A0A075B5Z4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Trav1A0A075B5Z4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav1A0A075B5Z4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav1A0A075B5Z4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav1A0A075B5Z4 Gm7417-201ENSMUST00000192950 473 ntBASIC18.71■□□□□ 0.59
Trav1A0A075B5Z4 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.71■□□□□ 0.59
Trav1A0A075B5Z4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Trav1A0A075B5Z4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trav1A0A075B5Z4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Gm15546-201ENSMUST00000122095 826 ntBASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Mir6236-201ENSMUST00000184437 123 ntBASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav1A0A075B5Z4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav1A0A075B5Z4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms