Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rad54bQ6PFE3 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm21039-201ENSMUST00000223359 2012 ntBASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm15808-201ENSMUST00000119046 604 ntBASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm4812-201ENSMUST00000182847 993 ntBASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm19091-201ENSMUST00000208120 978 ntBASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Nln-205ENSMUST00000224945 2486 ntBASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Rad54bQ6PFE3 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm12337-201ENSMUST00000119634 400 ntBASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rad54bQ6PFE3 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms