Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm13169-201ENSMUST00000122090 1459 ntBASIC9.97□□□□□ -0.81
VcanQ62059 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VcanQ62059 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VcanQ62059 Mir291b-201ENSMUST00000104838 79 ntBASIC9.97□□□□□ -0.81
VcanQ62059 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC9.97□□□□□ -0.81
VcanQ62059 Gm12950-201ENSMUST00000121683 417 ntBASIC9.97□□□□□ -0.81
VcanQ62059 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VcanQ62059 Gnb2-214ENSMUST00000168746 802 ntTSL 5 BASIC9.97□□□□□ -0.81
VcanQ62059 Gm15860-203ENSMUST00000197262 360 ntTSL 3 BASIC9.97□□□□□ -0.81
VcanQ62059 Gm33024-201ENSMUST00000203143 633 ntTSL 3 BASIC9.97□□□□□ -0.81
VcanQ62059 Gm21054-201ENSMUST00000203981 380 ntBASIC9.97□□□□□ -0.81
VcanQ62059 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VcanQ62059 Gm10254-201ENSMUST00000052888 867 ntBASIC9.97□□□□□ -0.81
VcanQ62059 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC9.97□□□□□ -0.81
VcanQ62059 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.97□□□□□ -0.81
VcanQ62059 4930455D15Rik-201ENSMUST00000181632 1616 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VcanQ62059 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VcanQ62059 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VcanQ62059 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VcanQ62059 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Cyp19a1-201ENSMUST00000034811 2373 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
VcanQ62059 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
VcanQ62059 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
VcanQ62059 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Gm13792-201ENSMUST00000121350 423 ntBASIC9.96□□□□□ -0.81
VcanQ62059 Gm40-201ENSMUST00000122131 660 ntBASIC9.96□□□□□ -0.81
VcanQ62059 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC9.96□□□□□ -0.81
VcanQ62059 E130114P18Rik-209ENSMUST00000186369 306 ntTSL 5 BASIC9.96□□□□□ -0.81
VcanQ62059 Gm5150-202ENSMUST00000194367 1212 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
VcanQ62059 Gm39481-201ENSMUST00000210379 512 ntBASIC9.96□□□□□ -0.81
VcanQ62059 H2al1j-201ENSMUST00000091180 330 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
VcanQ62059 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
VcanQ62059 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC9.96□□□□□ -0.81
VcanQ62059 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
VcanQ62059 Gm4865-201ENSMUST00000196284 1309 ntBASIC9.96□□□□□ -0.81
VcanQ62059 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.96□□□□□ -0.82
VcanQ62059 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 AC122858.2-201ENSMUST00000228571 1362 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Gm12452-201ENSMUST00000117128 331 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Gm6285-201ENSMUST00000122012 498 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC9.96□□□□□ -0.82
VcanQ62059 Mir5108-201ENSMUST00000175276 85 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Gm28179-201ENSMUST00000188365 613 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
VcanQ62059 Gm44124-201ENSMUST00000204159 472 ntBASIC9.96□□□□□ -0.82
VcanQ62059 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Pttg1-201ENSMUST00000020685 634 ntTSL 2 BASIC9.96□□□□□ -0.82
VcanQ62059 Gm8162-201ENSMUST00000213951 665 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Gm8171-201ENSMUST00000217443 720 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Arl15-202ENSMUST00000224068 1002 ntBASIC9.96□□□□□ -0.82
VcanQ62059 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
VcanQ62059 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
VcanQ62059 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
VcanQ62059 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Gm19798-201ENSMUST00000201502 457 ntBASIC9.95□□□□□ -0.82
VcanQ62059 4930547H16Rik-201ENSMUST00000222281 907 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VcanQ62059 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VcanQ62059 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC9.95□□□□□ -0.82
VcanQ62059 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.95□□□□□ -0.82
VcanQ62059 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Btrc-209ENSMUST00000224478 2194 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC9.95□□□□□ -0.82
VcanQ62059 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VcanQ62059 Gm14323-201ENSMUST00000122418 627 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
VcanQ62059 Gm24300-201ENSMUST00000177809 109 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Gm24017-201ENSMUST00000178726 109 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Gm23952-201ENSMUST00000179380 109 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Gm9515-201ENSMUST00000200276 647 ntBASIC9.95□□□□□ -0.82
VcanQ62059 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms