Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.5□□□□□ -0.89
Atf1P81269 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Atf1P81269 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Atf1P81269 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Atf1P81269 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Atf1P81269 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 AC154528.2-201ENSMUST00000228432 3023 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC9.49□□□□□ -0.89
Atf1P81269 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm16166-201ENSMUST00000118291 787 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.49□□□□□ -0.89
Atf1P81269 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.49□□□□□ -0.89
Atf1P81269 Gm15432-201ENSMUST00000121106 195 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm25226-201ENSMUST00000158198 123 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Gm7985-201ENSMUST00000183329 981 ntBASIC9.49□□□□□ -0.89
Atf1P81269 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC9.49□□□□□ -0.89
Atf1P81269 Platr10-202ENSMUST00000191479 818 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm30946-201ENSMUST00000198288 724 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm43916-201ENSMUST00000205062 967 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.49□□□□□ -0.89
Atf1P81269 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.49□□□□□ -0.89
Atf1P81269 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Atf1P81269 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
Atf1P81269 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Atf1P81269 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC9.48□□□□□ -0.89
Atf1P81269 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Atf1P81269 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Atf1P81269 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.48□□□□□ -0.89
Atf1P81269 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Atf1P81269 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC9.48□□□□□ -0.89
Atf1P81269 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Atf1P81269 Gm12570-201ENSMUST00000122047 1030 ntBASIC9.48□□□□□ -0.89
Atf1P81269 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC9.48□□□□□ -0.89
Atf1P81269 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Atf1P81269 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
Atf1P81269 Gm7255-201ENSMUST00000187371 908 ntBASIC9.48□□□□□ -0.89
Atf1P81269 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.48□□□□□ -0.89
Atf1P81269 Gm9445-201ENSMUST00000207454 1285 ntBASIC9.48□□□□□ -0.89
Atf1P81269 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
Atf1P81269 CT485606.1-201ENSMUST00000213187 878 ntBASIC9.48□□□□□ -0.89
Atf1P81269 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms