Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC11.66□□□□□ -0.54
NKX2-1P43699 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.66□□□□□ -0.54
NKX2-1P43699 AC138466.3-201ENST00000619983 221 ntBASIC11.66□□□□□ -0.54
NKX2-1P43699 AC008761.3-201ENST00000624803 892 ntBASIC11.66□□□□□ -0.54
NKX2-1P43699 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 VENTXP1-201ENST00000569334 2716 ntBASIC11.66□□□□□ -0.54
NKX2-1P43699 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
NKX2-1P43699 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
NKX2-1P43699 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 AL022323.5-201ENST00000624101 2059 ntBASIC11.66□□□□□ -0.54
NKX2-1P43699 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.66□□□□□ -0.54
NKX2-1P43699 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.66□□□□□ -0.54
NKX2-1P43699 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
NKX2-1P43699 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.65□□□□□ -0.54
NKX2-1P43699 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.65□□□□□ -0.54
NKX2-1P43699 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC055876.3-201ENST00000431496 288 ntBASIC11.65□□□□□ -0.54
NKX2-1P43699 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.65□□□□□ -0.54
NKX2-1P43699 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.65□□□□□ -0.54
NKX2-1P43699 DOC2GP-202ENST00000514950 1163 ntBASIC11.65□□□□□ -0.54
NKX2-1P43699 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.65□□□□□ -0.54
NKX2-1P43699 DUX4L27-201ENST00000554796 1261 ntBASIC11.65□□□□□ -0.54
NKX2-1P43699 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC008738.7-201ENST00000609744 511 ntBASIC11.65□□□□□ -0.54
NKX2-1P43699 AC138649.4-201ENST00000612222 287 ntBASIC11.65□□□□□ -0.54
NKX2-1P43699 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC102953.2-201ENST00000609755 3026 ntBASIC11.65□□□□□ -0.54
NKX2-1P43699 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
NKX2-1P43699 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.65□□□□□ -0.54
NKX2-1P43699 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.65□□□□□ -0.54
NKX2-1P43699 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
NKX2-1P43699 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.55
NKX2-1P43699 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
NKX2-1P43699 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC11.65□□□□□ -0.55
NKX2-1P43699 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
NKX2-1P43699 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC11.65□□□□□ -0.55
NKX2-1P43699 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.65□□□□□ -0.55
NKX2-1P43699 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
NKX2-1P43699 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.64□□□□□ -0.55
NKX2-1P43699 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.64□□□□□ -0.55
NKX2-1P43699 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.64□□□□□ -0.55
NKX2-1P43699 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
NKX2-1P43699 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
NKX2-1P43699 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms