Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC12.59□□□□□ -0.39
Vcam1P29533 Ptgds-203ENSMUST00000114259 775 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Vcam1P29533 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC12.59□□□□□ -0.39
Vcam1P29533 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC12.59□□□□□ -0.39
Vcam1P29533 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm5395-201ENSMUST00000121650 915 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm22876-201ENSMUST00000175450 298 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm6291-201ENSMUST00000179994 309 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Gm44953-201ENSMUST00000208745 1286 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC12.59□□□□□ -0.39
Vcam1P29533 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vcam1P29533 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm13104-201ENSMUST00000119651 1446 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vcam1P29533 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm6768-201ENSMUST00000022467 1878 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC12.59□□□□□ -0.39
Vcam1P29533 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Vcam1P29533 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Gm5697-201ENSMUST00000122295 2482 ntBASIC12.59□□□□□ -0.39
Vcam1P29533 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Vcam1P29533 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.58□□□□□ -0.4
Vcam1P29533 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.58□□□□□ -0.4
Vcam1P29533 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vcam1P29533 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Gm11544-201ENSMUST00000120215 382 ntBASIC12.58□□□□□ -0.4
Vcam1P29533 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Vcam1P29533 Gm13857-201ENSMUST00000139645 173 ntBASIC12.58□□□□□ -0.4
Vcam1P29533 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC12.58□□□□□ -0.4
Vcam1P29533 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.58□□□□□ -0.4
Vcam1P29533 Gm5254-201ENSMUST00000188353 977 ntBASIC12.58□□□□□ -0.4
Vcam1P29533 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Gm43610-201ENSMUST00000199117 365 ntBASIC12.58□□□□□ -0.4
Vcam1P29533 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Vcam1P29533 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.58□□□□□ -0.4
Vcam1P29533 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Vcam1P29533 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Vcam1P29533 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.57□□□□□ -0.4
Vcam1P29533 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.57□□□□□ -0.4
Vcam1P29533 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Vcam1P29533 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Ino80dos-201ENSMUST00000138611 1576 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Vcam1P29533 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Vcam1P29533 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Vcam1P29533 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Gm12028-201ENSMUST00000118065 436 ntBASIC12.57□□□□□ -0.4
Vcam1P29533 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.57□□□□□ -0.4
Vcam1P29533 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Vcam1P29533 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.57□□□□□ -0.4
Vcam1P29533 Gm43854-201ENSMUST00000200418 394 ntBASIC12.57□□□□□ -0.4
Vcam1P29533 Gm14005-208ENSMUST00000223654 681 ntBASIC12.57□□□□□ -0.4
Vcam1P29533 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms