Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
TPM3P06753 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 AC087499.6-201ENST00000411576 835 ntBASIC15.94■□□□□ 0.14
TPM3P06753 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.94■□□□□ 0.14
TPM3P06753 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
TPM3P06753 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.94■□□□□ 0.14
TPM3P06753 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 CLUHP6-201ENST00000580789 941 ntBASIC15.94■□□□□ 0.14
TPM3P06753 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.94■□□□□ 0.14
TPM3P06753 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.94■□□□□ 0.14
TPM3P06753 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TPM3P06753 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.94■□□□□ 0.14
TPM3P06753 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 CIC-204ENST00000572681 8218 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
TPM3P06753 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
TPM3P06753 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 CU634019.7-201ENST00000624153 1185 ntBASIC15.93■□□□□ 0.14
TPM3P06753 FP236241.2-201ENST00000624906 1185 ntBASIC15.93■□□□□ 0.14
TPM3P06753 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
TPM3P06753 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC15.93■□□□□ 0.14
TPM3P06753 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TPM3P06753 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC15.93■□□□□ 0.14
TPM3P06753 AP001972.5-201ENST00000624624 2338 ntBASIC15.93■□□□□ 0.14
TPM3P06753 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
TPM3P06753 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM3P06753 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TPM3P06753 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.92■□□□□ 0.14
TPM3P06753 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms