Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P04213 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P04213 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.48□□□□□ -0.73
P04213 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P04213 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.48□□□□□ -0.73
P04213 Gm23771-201ENSMUST00000178702 110 ntBASIC10.48□□□□□ -0.73
P04213 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Gm27910-201ENSMUST00000185004 107 ntBASIC10.48□□□□□ -0.73
P04213 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
P04213 Gm5865-201ENSMUST00000198713 637 ntBASIC10.48□□□□□ -0.73
P04213 Gm43378-201ENSMUST00000199336 582 ntBASIC10.48□□□□□ -0.73
P04213 Gm42859-201ENSMUST00000199572 193 ntBASIC10.48□□□□□ -0.73
P04213 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.48□□□□□ -0.73
P04213 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.48□□□□□ -0.73
P04213 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Gm30671-201ENSMUST00000214898 318 ntBASIC10.48□□□□□ -0.73
P04213 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.48□□□□□ -0.73
P04213 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC10.48□□□□□ -0.73
P04213 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.48□□□□□ -0.73
P04213 AC154849.4-201ENSMUST00000224868 365 ntBASIC10.48□□□□□ -0.73
P04213 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.48□□□□□ -0.73
P04213 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
P04213 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.48□□□□□ -0.73
P04213 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.48□□□□□ -0.73
P04213 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
P04213 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.48□□□□□ -0.73
P04213 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04213 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.48□□□□□ -0.73
P04213 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P04213 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
P04213 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.47□□□□□ -0.73
P04213 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
P04213 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
P04213 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
P04213 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC10.47□□□□□ -0.73
P04213 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.47□□□□□ -0.73
P04213 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.47□□□□□ -0.73
P04213 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.47□□□□□ -0.73
P04213 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC10.47□□□□□ -0.73
P04213 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC10.47□□□□□ -0.73
P04213 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.47□□□□□ -0.73
P04213 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.47□□□□□ -0.73
P04213 Gm25226-201ENSMUST00000158198 123 ntBASIC10.47□□□□□ -0.73
P04213 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.47□□□□□ -0.73
P04213 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.47□□□□□ -0.73
P04213 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
P04213 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.47□□□□□ -0.73
P04213 Gm9211-201ENSMUST00000182882 975 ntBASIC10.47□□□□□ -0.73
P04213 Gm9369-201ENSMUST00000196009 733 ntBASIC10.47□□□□□ -0.73
P04213 Gm18561-201ENSMUST00000206027 804 ntBASIC10.47□□□□□ -0.73
P04213 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.47□□□□□ -0.73
P04213 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.47□□□□□ -0.73
P04213 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Gm18042-201ENSMUST00000219887 790 ntBASIC10.47□□□□□ -0.73
P04213 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.47□□□□□ -0.73
P04213 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC10.47□□□□□ -0.73
P04213 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.47□□□□□ -0.73
P04213 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.47□□□□□ -0.73
P04213 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.47□□□□□ -0.73
P04213 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
P04213 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC10.47□□□□□ -0.73
P04213 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms