Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atf6F6VAN0 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atf6F6VAN0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Atf6F6VAN0 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.31□□□□□ -0.6
Atf6F6VAN0 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atf6F6VAN0 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Atf6F6VAN0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.3□□□□□ -0.6
Atf6F6VAN0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm12986-201ENSMUST00000119037 967 ntBASIC11.3□□□□□ -0.6
Atf6F6VAN0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.3□□□□□ -0.6
Atf6F6VAN0 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm7430-201ENSMUST00000193824 1144 ntBASIC11.3□□□□□ -0.6
Atf6F6VAN0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.3□□□□□ -0.6
Atf6F6VAN0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.3□□□□□ -0.6
Atf6F6VAN0 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf6F6VAN0 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm14542-201ENSMUST00000118460 1248 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Snord55-201ENSMUST00000174939 79 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm23771-201ENSMUST00000178702 110 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm27910-201ENSMUST00000185004 107 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm4753-201ENSMUST00000188327 1255 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm43520-201ENSMUST00000197996 164 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms