Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm14807-201ENSMUST00000116640 983 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm5529-201ENSMUST00000165691 891 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm26976-201ENSMUST00000182929 908 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm7985-201ENSMUST00000183329 981 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm18776-201ENSMUST00000188833 654 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm18968-201ENSMUST00000221319 862 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm38312-201ENSMUST00000195426 1746 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm28833-201ENSMUST00000189671 559 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Upk3aQ9JKX8 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Upk3aQ9JKX8 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms