Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Cts7-204ENSMUST00000225321 1257 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Nkap-201ENSMUST00000016553 4230 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm15953-201ENSMUST00000117656 1732 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 CT033774.1-201ENSMUST00000223084 2394 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Atp6v0a4-201ENSMUST00000040259 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ube4bQ9ES00 Dcc-201ENSMUST00000073379 4855 ntTSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm26865-201ENSMUST00000180970 3284 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Aasdhppt-201ENSMUST00000051589 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Pax6-206ENSMUST00000111086 2601 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Mid1-202ENSMUST00000078947 3591 ntTSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm43630-201ENSMUST00000201550 776 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 AC117656.2-201ENSMUST00000224931 2215 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Car12-201ENSMUST00000071889 3716 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Elf4-201ENSMUST00000033429 5847 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 CT010447.1-201ENSMUST00000225657 1608 ntBASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ube4bQ9ES00 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Tada2a-201ENSMUST00000018795 2151 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Sh2d7-201ENSMUST00000060242 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Nudcd3-201ENSMUST00000066496 3927 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm37447-201ENSMUST00000195625 2928 ntBASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.5□□□□□ -0.73
Ube4bQ9ES00 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms