Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.62□□□□□ -0.39
Vcam1P29533 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.62□□□□□ -0.39
Vcam1P29533 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vcam1P29533 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vcam1P29533 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC12.61□□□□□ -0.39
Vcam1P29533 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Gm12418-201ENSMUST00000118116 942 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Gm8019-201ENSMUST00000119317 587 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC12.61□□□□□ -0.39
Vcam1P29533 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Gm8384-201ENSMUST00000190905 704 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.61□□□□□ -0.39
Vcam1P29533 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
Vcam1P29533 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Vcam1P29533 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vcam1P29533 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vcam1P29533 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 4932438H23Rik-201ENSMUST00000035689 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC12.6□□□□□ -0.39
Vcam1P29533 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Vcam1P29533 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.6□□□□□ -0.39
Vcam1P29533 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.6□□□□□ -0.39
Vcam1P29533 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Gm11465-201ENSMUST00000127942 435 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.6□□□□□ -0.39
Vcam1P29533 Gm5808-201ENSMUST00000178090 357 ntBASIC12.6□□□□□ -0.39
Vcam1P29533 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vcam1P29533 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.6□□□□□ -0.39
Vcam1P29533 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Gm7238-201ENSMUST00000206467 973 ntBASIC12.6□□□□□ -0.39
Vcam1P29533 Gm6331-201ENSMUST00000217890 450 ntBASIC12.6□□□□□ -0.39
Vcam1P29533 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 AC152169.1-201ENSMUST00000223901 701 ntBASIC12.6□□□□□ -0.39
Vcam1P29533 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vcam1P29533 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.6□□□□□ -0.39
Vcam1P29533 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vcam1P29533 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.59□□□□□ -0.39
Vcam1P29533 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vcam1P29533 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Vcam1P29533 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms