Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC8.93□□□□□ -0.98
Cdx1P18111 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm18986-201ENSMUST00000216029 1986 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 AC122273.1-201ENSMUST00000213634 2327 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC8.93□□□□□ -0.98
Cdx1P18111 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Man1b1-201ENSMUST00000042390 3755 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm26751-201ENSMUST00000181218 4245 ntTSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm45124-201ENSMUST00000206723 2755 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gin1-203ENSMUST00000112844 2046 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Cdx1P18111 Ctc1-211ENSMUST00000161455 3989 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm13611-201ENSMUST00000118269 318 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm11597-201ENSMUST00000121423 964 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC8.92□□□□□ -0.98
Cdx1P18111 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC8.92□□□□□ -0.98
Cdx1P18111 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm3508-201ENSMUST00000186012 792 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm44136-201ENSMUST00000203819 1106 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 Gm44100-201ENSMUST00000204329 436 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 Gm18393-201ENSMUST00000208349 1131 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC8.92□□□□□ -0.98
Cdx1P18111 Dhrs4-202ENSMUST00000226168 828 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Slc23a1-201ENSMUST00000025212 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Ogdh-204ENSMUST00000101554 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 B3galt5-201ENSMUST00000099497 5147 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Cdx1P18111 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Nedd1-201ENSMUST00000020163 3534 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 AC165351.1-201ENSMUST00000219078 2020 ntBASIC8.92□□□□□ -0.98
Cdx1P18111 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Cdx1P18111 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Cdx1P18111 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC8.91□□□□□ -0.98
Cdx1P18111 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx1P18111 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx1P18111 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx1P18111 Gm43517-201ENSMUST00000110746 3904 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Cdx1P18111 Gm26724-201ENSMUST00000180434 1650 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx1P18111 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx1P18111 AC158779.1-201ENSMUST00000228912 3861 ntBASIC8.91□□□□□ -0.98
Cdx1P18111 Rassf2-201ENSMUST00000028814 8233 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Cdx1P18111 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC8.91□□□□□ -0.98
Cdx1P18111 Gm38227-201ENSMUST00000193036 1602 ntBASIC8.91□□□□□ -0.98
Cdx1P18111 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms