Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Igh-VJ558P01758 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Snord23-201ENSMUST00000116828 109 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm14892-201ENSMUST00000117636 267 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Mir5132-201ENSMUST00000175166 71 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm5210-201ENSMUST00000182150 1010 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm43380-201ENSMUST00000200421 220 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm19091-201ENSMUST00000208120 978 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 AC164618.2-201ENSMUST00000224770 573 ntBASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Igh-VJ558P01758 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Mir1893-201ENSMUST00000122565 83 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm6407-201ENSMUST00000176468 549 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm7047-201ENSMUST00000196224 1063 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm44329-201ENSMUST00000197469 112 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm2875-201ENSMUST00000211333 360 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Igh-VJ558P01758 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms