Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NpcdF8VQB8 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm6291-201ENSMUST00000179994 309 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Mir7088-201ENSMUST00000184227 86 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm38314-201ENSMUST00000195709 625 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm5738-201ENSMUST00000206016 779 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.32□□□□□ -0.28
NpcdF8VQB8 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NpcdF8VQB8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Gm11473-201ENSMUST00000118980 359 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Gm12745-201ENSMUST00000121767 214 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Mir8091-201ENSMUST00000183602 139 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Gm7880-201ENSMUST00000203748 871 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC13.31□□□□□ -0.28
NpcdF8VQB8 AC125409.3-201ENSMUST00000223488 653 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 CT010505.2-201ENSMUST00000227918 998 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Gm4778-201ENSMUST00000098878 1098 ntBASIC13.31□□□□□ -0.28
NpcdF8VQB8 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NpcdF8VQB8 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms