Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC9.04□□□□□ -0.96
VhlP40338 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
VhlP40338 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
VhlP40338 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
VhlP40338 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
VhlP40338 Nln-205ENSMUST00000224945 2486 ntBASIC9.03□□□□□ -0.96
VhlP40338 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
VhlP40338 Gm22323-201ENSMUST00000103832 109 ntBASIC9.03□□□□□ -0.96
VhlP40338 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC9.03□□□□□ -0.96
VhlP40338 Gm15329-201ENSMUST00000121408 155 ntBASIC9.03□□□□□ -0.96
VhlP40338 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC9.03□□□□□ -0.96
VhlP40338 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC9.03□□□□□ -0.96
VhlP40338 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.03□□□□□ -0.96
VhlP40338 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
VhlP40338 Gm7741-201ENSMUST00000181445 989 ntBASIC9.03□□□□□ -0.96
VhlP40338 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Gm44967-201ENSMUST00000207047 631 ntBASIC9.03□□□□□ -0.96
VhlP40338 Gm31941-201ENSMUST00000209689 350 ntBASIC9.03□□□□□ -0.96
VhlP40338 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 CT009713.8-202ENSMUST00000224732 385 ntBASIC9.03□□□□□ -0.96
VhlP40338 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
VhlP40338 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.03□□□□□ -0.96
VhlP40338 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.03□□□□□ -0.96
VhlP40338 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
VhlP40338 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
VhlP40338 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VhlP40338 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
VhlP40338 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC9.02□□□□□ -0.96
VhlP40338 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
VhlP40338 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
VhlP40338 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC9.02□□□□□ -0.96
VhlP40338 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.96
VhlP40338 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.02□□□□□ -0.97
VhlP40338 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Gm12012-201ENSMUST00000118857 1066 ntBASIC9.02□□□□□ -0.97
VhlP40338 Gm15711-201ENSMUST00000118889 535 ntBASIC9.02□□□□□ -0.97
VhlP40338 Gm4760-201ENSMUST00000119663 1030 ntBASIC9.02□□□□□ -0.97
VhlP40338 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
VhlP40338 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC9.02□□□□□ -0.97
VhlP40338 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC9.02□□□□□ -0.97
VhlP40338 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms