Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Col8a2P25318 Gm26670-202ENSMUST00000226862 340 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC9.18□□□□□ -0.94
Col8a2P25318 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Mir483-201ENSMUST00000093631 73 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.18□□□□□ -0.94
Col8a2P25318 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Col8a2P25318 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm37368-201ENSMUST00000193173 3212 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm6641-201ENSMUST00000196100 1315 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC9.17□□□□□ -0.94
Col8a2P25318 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm11801-201ENSMUST00000117807 746 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm14165-201ENSMUST00000121456 952 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm9162-201ENSMUST00000182081 991 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Gm26982-201ENSMUST00000182250 1151 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 CT010480.2-201ENSMUST00000225424 737 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC9.17□□□□□ -0.94
Col8a2P25318 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm37264-201ENSMUST00000194916 2192 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Gm36940-201ENSMUST00000194281 2036 ntBASIC9.17□□□□□ -0.94
Col8a2P25318 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Col8a2P25318 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Col8a2P25318 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Col8a2P25318 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.16□□□□□ -0.94
Col8a2P25318 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms