Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Gphn-201ENSMUST00000052472 3570 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Cass4-201ENSMUST00000099061 3731 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm21817-201ENSMUST00000178584 2583 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cdx1P18111 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Ccdc116-202ENSMUST00000115709 1900 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm9062-201ENSMUST00000117712 727 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC8.94□□□□□ -0.98
Cdx1P18111 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Rmrp-201ENSMUST00000157463 271 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm8494-201ENSMUST00000178171 1233 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Il12rb2-201ENSMUST00000018485 2998 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC8.94□□□□□ -0.98
Cdx1P18111 Ighv5-7-201ENSMUST00000192302 244 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 AU022133-201ENSMUST00000200601 873 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Spcs1-203ENSMUST00000226374 592 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 AL732506.1-201ENSMUST00000226420 281 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 A730018C14Rik-201ENSMUST00000050754 2253 ntTSL 2 BASIC8.94□□□□□ -0.98
Cdx1P18111 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.94□□□□□ -0.98
Cdx1P18111 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Ralgps2-202ENSMUST00000063199 2947 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Col6a5-203ENSMUST00000190193 9289 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Cdx1P18111 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cdx1P18111 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Tacc2-208ENSMUST00000207549 3492 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Akap1-203ENSMUST00000107904 2673 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cdx1P18111 1700030K09Rik-201ENSMUST00000064853 2887 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cdx1P18111 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm9550-201ENSMUST00000161130 862 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm20426-201ENSMUST00000173657 440 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Gm28071-201ENSMUST00000190355 478 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Gm37666-201ENSMUST00000194110 866 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Gm7003-201ENSMUST00000195089 312 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Gm38314-201ENSMUST00000195709 625 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm10109-202ENSMUST00000206890 1211 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Gm7848-201ENSMUST00000210739 718 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 AC153929.1-201ENSMUST00000219009 303 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Gm29787-201ENSMUST00000222129 849 ntBASIC8.93□□□□□ -0.98
Cdx1P18111 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Cdx1P18111 Echdc1-201ENSMUST00000020034 3856 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Cdx1P18111 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms