Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm6677-201ENSMUST00000195100 441 ntBASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm33080-201ENSMUST00000205429 172 ntBASIC13.21□□□□□ -0.29
Vps54Q5SPW0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm8181-201ENSMUST00000062242 669 ntBASIC13.21□□□□□ -0.29
Vps54Q5SPW0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Hyal2-206ENSMUST00000195681 2968 ntBASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Vps54Q5SPW0 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Vps54Q5SPW0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm13351-201ENSMUST00000118087 414 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm13019-201ENSMUST00000120000 276 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm14165-201ENSMUST00000121456 952 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm5529-201ENSMUST00000165691 891 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm43912-201ENSMUST00000204352 538 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm18042-201ENSMUST00000219887 790 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 AC164429.1-201ENSMUST00000224210 518 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 BX649293.1-201ENSMUST00000227437 631 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm25517-201ENSMUST00000083865 134 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Vps54Q5SPW0 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Mir1893-201ENSMUST00000122565 83 ntBASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gm24809-201ENSMUST00000175318 271 ntBASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Uba52-ps-201ENSMUST00000183770 379 ntBASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.19□□□□□ -0.3
Vps54Q5SPW0 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC13.19□□□□□ -0.3
Vps54Q5SPW0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms