Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Syne3Q4FZC9 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm15374-201ENSMUST00000119313 844 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm16071-201ENSMUST00000119589 793 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm5523-201ENSMUST00000180415 997 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm17826-201ENSMUST00000189720 798 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm37826-201ENSMUST00000195329 322 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Syne3Q4FZC9 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Gm25148-201ENSMUST00000104611 123 ntBASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Mir7051-201ENSMUST00000184167 73 ntBASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Gm37597-201ENSMUST00000191853 382 ntBASIC11.72□□□□□ -0.53
Syne3Q4FZC9 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.72□□□□□ -0.53
Syne3Q4FZC9 Gm9463-201ENSMUST00000206707 601 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms